Awesome References to Ocimum Biosolutions

I started to write a post on the Gene Logic database references and I realized that we have a lot more than that, so I thought that while I was at it, I could put together some of the recent references to other products that we have.  I am hoping that one of you very smart folks will point out those that I am not aware of and let me build this awesome collection.

I shall start with 2011 first…. yes we already have some that appeared this year….

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Articles in 2011

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1. The NO-responsive hemoglobins of Campylobacter jejuni: Concerted responses of two globins to NO and evidence in vitro for globin regulation by the transcription factor NssR

Holly Smith^a, Mark Shepherd^1, a, Claire Monk^a, Jeffrey Green^a and Robert K. Poole^, a, 

^a Department of Molecular Biology and Biotechnology, The University of Sheffield, Firth Court, Western Bank, Sheffield S10 2TN, UK

this paper references our Campylobacter jejuni chip

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2. Determination of drug susceptibility patterns and genotypes of Mycobacterium tuberculosis isolates from Kanpur district, North India

and Devendra Singh Chauhan^b, 

^a Department of Tuberculosis and Respiratory Diseases, Ganesh Shankar Vidyarthi Memorial Medical College, Kanpur, India

^b National JALMA Institute for Leprosy and Other Mycobacterial Diseases (ICMR), Agra, India

We have a wonderful spoligotyping kit that has been used by a large number of researchers worldwide. This publication references those kits that were manufactured by Ocimum Biosolutions.

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3. Establishing reference genes for use in real-time quantitative PCR analysis of early equine embryos

primers used in equine studies… nice

I am wondering if this is too much information overload for one day, but it isn’t every Sunday that I get all to myself so I shall indulge in some of this fun stuff more.

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4.  Pathology of Camel Tuberculosis and Molecular Characterization of Its Causative Agents in Pastoral Regions of Ethiopia

Gezahegne Mamo^2,3*, Gizachew Bayleyegn², Tesfaye Sisay Tessema², Mengistu Legesse^1,3, Girmay Medhin¹, Gunnar Bjune³, Fekadu Abebe³, Gobena Ameni¹

1 Aklilu Lemma Institute of Pathobiology, Addis Ababa University, Addis Ababa, Ethiopia, 2 Faculty of Veterinary Medicine, Addis Ababa University, Debre Zeit, Ethiopia, 3 Department of General Practice and Community Medicine, Faculty of Medicine, Institute of Health and Society, University of Oslo, Oslo, Norway

I found this especially interesting as the study of camel tuberculosis in Ethiopia.

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5. Functional Promoter Polymorphisms Govern Differential Expression of HMG-CoA Reductase Gene in Mouse Models of Essential Hypertension

[HTML] from plos.orgPJ Sonawane, BS Sahu, BK Sasi, P Geedi… – PloS one, 2011 – dx.plos.org
… The following oligos and their complementary strands were obtained from Ocimum Biosolutions,
India

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6. Genetic Alliance Registry and BioBank: a novel disease advocacy-driven research solution

Sharon F Terry^†1,2, Elizabeth J Horn¹, Joan Scott^3,4 & Patrick F Terry^2,3,5

† Author for correspondence

The Genetic Alliance Registry and BioBank was founded in 2003 on the principal that a shared infrastructure would facilitate easy flow of resources and accelerate disease-specific research.

The article mentions Gene Logic as a partner for Biorepository, TRIMS registry, Genesis data mining software, Clinical questionnaire interface

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7. A Phase II Trial of Paclitaxel and Carboplatin in Women With Advanced or Recurrent Uterine Carcinosarcoma

RA Lacour, E Euscher, EN Atkinson… – International …, 2011 – pdfs.journals.lww.com
… Likewise, defects in DNA mismatch repair and TP53 have been recognized as factors in uterine
CS tu- morigenesis.23 This, along with the suggestion of PARP over- expression in uterine CS
(ASCENTA database; Gene Logic, Gaithersburg, Md), brings the exploration of novel

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8. [HTML] Identifying Consensus Disease Pathways in Parkinson’s Disease Using an Integrative Systems Biology Approach

[HTML] from plos.orgYJK Edwards, GW Beecham, WK Scott, S Khuri… – PloS one, 2011 – dx.plos.org
… of Medicine, University of Miami, Miami, Florida, United States of America, 3 Department of
Neurology and Molecular and Cellular Pharmacology, Miller School of Medicine, University of
Miami, Miami, Florida, United States of America, 4 Gene Logic, Gaithersburg, Maryland

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11. [PDF] Pandemic (H1N1) 2009 influenza virus induces weaker host immune responses in vitro: a possible mechanism of high transmissibility

[PDF] from virologyj.comS Mukherjee, VC Vipat, AC Mishra, SD Pawar… – Virology …, 2011 – virologyj.com
… MS EXCEL [15]. Data Analysis Microarray data analysis was carried out with
GENOWIZ Microarray data and pathway analysis tool (Ocimum Biosolutions,
Hyderabad, India).

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12. Genome-Wide Analysis of RNA Extracted from Isolated Mitochondria.

E Eliyahu, D Melamed… – Methods in molecular biology (Clifton, …, 2011 – Springer
… 11. Slides Blocking Buffer – 0.5% BSA (A7906 sigma), 5× saline- sodium citrate buffer (SSC),
and 1% SDS. 12. Hybridization Buffer – 2× MWG buffer (Ocimum Biosolutions 1180-000010).

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13.[PDF] Distribution pattern of HCV genotypes & its association with viral load

[PDF] from icmr.nic.inA Chakravarti, G Dogra, V Verma… – Indian J Med Res, 2011 – icmr.nic.in
… out at 42 0C for 1 h. Direct PCR was performed with the cDNA in the reaction mixture containing
PCR buffer (10 X), 2.5 mmol/µl MgCl2, 250 µmol/µl dNTPs, 0.75 U Taq DNA polymerase (MBI
Fermentas, Lithunia), and 20 pmol primers (Ocimum Biosolutions, Hyderabad)

Articles in 2010

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1 . OI-57, a genomic island of Escherichia coli O157, is present in other seropathotypes of Shiga toxin-producing E. coli associated with severe human disease

Lejla Imamovic, Rosangela Tozzoli, Valeria Michelacci, Fabio Minelli,Maria Luisa Marziano, Alfredo Caprioli, and Stefano Morabito^*

European Union Reference Laboratory for Escherichia coli, Istituto Superiore di Sanità, Dipartimento di Sanità Pubblica Veterinaria e Sicurezza Alimentare, Rome, Italy

Damien B. B. P. Paris ^A E F, Ewart W. Kuijk ^B C, Bernard A. J. Roelen ^A D and Tom A. E. Stout ^A D

Italian researchers using our extremely popular E-coli chip

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2.  Crucial Role for Insertion Sequence Elements inLactobacillus helveticus Evolution as Revealed by Interstrain Genomic Comparison 

Pawel Kaleta,¹ John O’Callaghan,¹ Gerald F. Fitzgerald,^2,3 Thomas P. Beresford,^1* and R. Paul Ross^1,2

Teagasc, Moorepark Food Research Centre, Moorepark, Fermoy, County Cork, Ireland,¹ Alimentary Pharmabiotic Centre, Cork, County Cork, Ireland,²Department of Microbiology, University College Cork, Cork, County Cork, Ireland³

And now this one came from Ireland and it uses a custom cDNA chip that they obtained from us. Very nice

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3. Compensations for Diminished Terminal Oxidase Activity in Escherichia coli

CYTOCHROME bd-II-MEDIATED RESPIRATION AND GLUTAMATE METABOLISM*

Mark Shepherd^‡,¹Guido Sanguinetti^§,Gregory M. Cook^¶ and Robert K. Poole^‡

This one also references the E-coli chip used at Sheffield.

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4.  Diabetogenic glucose and insulin concentrations modulate transcriptom and protein levels involved in tumour cell migration, adhesion and proliferation

K Masur¹, C Vetter¹, A Hinz¹, N Tomas¹, H Henrich¹, B Niggemann¹ and K S Zänker¹

¹Institute of Immunology and Experimental Oncology, University Witten/Herdecke, Stockumer Str. 10, Witten 58448, Germany

this also uses some of our custom chips.

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5. Comparison of Restriction Fragment Length Polymorphism with the Polymorphic Guanine-Cytosine-Rich Sequence and Spoligotyping for Differentiation ofMycobacterium tuberculosis Isolates with Five or Fewer Copies of IS6110

Laura Flores,¹ Leah G. Jarlsberg,¹ Elizabeth Y. Kim,¹ Dennis Osmond,²Jennifer Grinsdale,³ Masae Kawamura,³ Ed Desmond,⁴ Philip C. Hopewell,¹ and Midori Kato-Maeda^1*

Francis J. Curry National Tuberculosis Center, Division of Pulmonary and Critical Care Medicine, San Francisco General Hospital, Department of Medicine, University of California, San Francisco, San Francisco, California,¹ Department of Epidemiology and Biostatistics University of California, San Francisco, San Francisco, California,² Tuberculosis Control Section, San Francisco Department of Public Health,³ Microbial Diseases Laboratory, California Department of Public Health, Richmond, California⁴

this also uses our spoligotyping kits.

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6.  Sphingosine 1-phosphate receptor 1 and 3 are upregulated in multiple sclerosis lesions

this uses our oligos.

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7. Are adenosquamous lung carcinomas a simple mix of adenocarcinomas andsquamous cell carcinomas, or more complex at the molecular level?

Kristell Bastide^a, , , Nicolas Ugolin^a, Céline Levalois^a, Jean-François Bernaudin^b and Sylvie Chevillard^a

^a CEA, DSV, IRCM, SREIT, Laboratoire de Cancérologie Expérimentale, BP6, Fontenay-aux-Roses Cedex F-92265, France

This paper by french researchers uses our oligoset.

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8.  Host gene expression profiling in influenza A virus-infected lung epithelial (A549) cells: a comparative analysis between highly pathogenic and modified H5N1 viruses

Alok K Chakrabarti,¹ Veena C Vipat,¹ Sanjay Mukherjee,¹ Rashmi Singh,¹Shailesh D Pawar,¹ and Akhilesh C Mishra¹

¹Microbial Containment Complex, National Institute of Virology, Sus Road, Pashan, Pune – 411021 India

This refers to our Genowiz tool for data analysis.

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9. A stage-scanning laser confocal microscope and protocol for DNA methylation sequencingVaithilingam Vaishnavi, Litty Varghese, Baquir Mohammed Jaffar AliLife Sciences Division, AU-KBC Research Centre, Anna University, Chennai, India.

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10. Transcriptional changes associated with ethanol tolerance in Saccharomyces cerevisiaeDragana Stanley, Paul J. Chambers, Grant A. Stanley, Anthony Borneman and Sarah FraserThey used Genowiz for their analysis.

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11. ResearchpARIS-htt: an optimised expression platform to study huntingtin reveals functional domains required for vesicular traffickingRaúl Pardo†1,2,3, Maria Molina-Calavita†1,2,3, Ghislaine Poizat1,2,3, Guy Keryer1,2,3, Sandrine Humbert1,2,3 and Frédéric Saudou*1,2,

very interesting paper found in molecular brain.
pARIS-htt was engineered based on the cDNA of fulllengh human htt using OptGene (Ocimum Biosolutions,Hyderabad, India) gene optimizing tool.

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12. Silicon enhances suberization and lignification in roots of rice (Oryza sativa)

Alexander T. Fleck^1,*, Thandar Nye¹, Cornelia Repenning², Frank Stahl², Marc Zahn¹ and Manfred K. Schenk¹

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13. Fitness of Mycobacterium tuberculosis Strains of the W-Beijing and Non-W-Beijing Genotype

Andrea von Groll^1*, Anandi Martin¹, Matthias Stehr², Mahavir Singh², Françoise Portaels¹, Pedro Eduardo Almeida da Silva³, Juan Carlos Palomino¹

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14. Effect of osmotic stress on plant growth promoting Pseudomonas spp.Sandhya V, Ali SZ, Venkateswarlu B, Reddy G, Grover M.Department of Microbiology, Central Research Institute for Dryland Agriculture, Santoshnagar, Hyderabad, Andhra Pradesh, India.

Abstract

In this study we isolated and screened drought tolerant Pseudomonas isolates from arid and semi arid crop production systems of India. Five isolates could tolerate osmotic stress up to -0.73 MPa and possessed multiple PGP properties such as P-solubilization, production of phytohormones (IAA, GA and cytokinin), siderophores, ammonia and HCN however under osmotic stress expression of PGP traits was low compared to non-stressed conditions. The strains were identified as Pseudomonas entomophila, Pseudomonas stutzeri, Pseudomonas putida, Pseudomonas syringae and Pseudomonas monteilli respectively on the basis of 16S rRNA gene sequence analysis. Osmotic stress affected growth pattern of all the isolates as indicated by increased mean generation time. An increase level of intracellular free amino acids, proline, total soluble sugars and exopolysaccharides was observed under osmotic stress suggesting bacterial response to applied stress. Further, strains GAP-P45 and GRFHYTP52 showing higher levels of EPS and osmolytes (amino acids and proline) accumulation under stress as compared to non-stress conditions, also exhibited higher expression of PGP traits under stress indicating a relationship between stress response and expression of PGP traits. We conclude that isolation and screening of indigenous, stress adaptable strains possessing PGP traits can be a method for selection of efficient stress tolerant PGPR strains.

Tags

This references our sequencing services.

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15. Nitrile-metabolizing potential of Amycolatopsis sp. IITR215

Vikash Babu^a, Shilpi^a and Bijan Choudhury^, a, 

^a Department of Biotechnology, Indian Institute of Technology, IIT Roorkee, Roorkee-247667, Uttarakhand, India

Abstract

Strain Amycolatopsis sp. IITR215 was isolated from a sewage sample using polyacrylonitrile powder as the sole nitrogen source. Identification was performed by 16S rDNA analysis. The isolated strain harbored multiple nitrile-metabolizing enzymes having a wide range of substrate specificities. It metabolized nitrile and amide compounds with constitutive enzymes. Studies using an amidase inhibitor showed that hydrolysis of acrylonitrile and acrylamide occurred due to nitrile hydratase and amidase, respectively, while hydrolysis of hexanenitrile was due to the action of either nitrilase or a second nitrile hydratase/amidase system. The inhibitory effects of N-bromosuccinimide and N-ethylmaleimide on enzymes of this culture were also studied and this further indicated the involvement of either a nitrilase or a second nitrile hydratase/amidase system for hydrolysis of hexanenitrile. Interestingly, hexanenitrile hydrolysis exhibited an optimum temperature of 55 °C, whereas acrylonitrile and acrylamide hydrolysis showed an optimum temperature of 45 °C. The optimum pH was 5.8 for hexanenitrile hydrolysis and 7.0 for acrylonitrile and acrylamide hydrolysis. Hexanenitrile hydrolysis by enzymes of this strain showed better organic solvent tolerance in the presence of alcohols. The maximum enzyme activity of nitrile-metabolizing enzymes was found using media containing isobutyramide as the nitrogen source. This is the first report on constitutive multiple enzymes from the Amycolatopsis genus.

Tags

This references our sequencing services

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16. Characterization of Pseudomonas aeruginosa RM-3 as a Potential Biocontrol Agent

Authors: Minaxi¹; Saxena, Jyoti²

Source: Mycopathologia, Volume 170, Number 3, September 2010 , pp. 181-193(13)

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This references our sequencing services.

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Articles in 2009

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1. Gene expression profiling of alpha-radiation-induced rat osteosarcomas: Identification of dysregulated genes involved in radiation-induced tumorigenesis of bone

Kazuhiro Daino, Nicolas Ugolin, Sandrine Altmeyer-Morel, Marie-Noëlle Guilly, Sylvie Chevillard,^†

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2. TLR2 polymorphisms, Arg753Gln and Arg677Trp, are not associated with increased burden of tuberculosis in Indian patients Debasis Biswas¹, Shailendra K Gupta², Girish Sindhwani³and Abhishek Patras¹

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3. Indian Biotech Sector Paving for Strong Growth

Deepak Ranjan , Shuchi Jaiswal

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4.Vitamin D: bringing light to the issue

Stiff, Lynn,Miller, Sharon M.

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5. ROLES FOR HIGH AFFINITY ZINC BINDING BY ZinT, ZINC TRANSPORT AND ZINC-INDEPENDENT PROTEINS

Alison I. Graham^‡, Stuart Hunt^‡, Sarah L. Stokes^§, Neil Bramall^§, Josephine Bunch^§,1, Alan G. Cox^§, Cameron W. McLeod^§ and Robert K. Poole^‡,2

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6. Coordination of genomic structure and transcription by the main bacterial nucleoid-associated protein HU

Michael Berger¹, Anca Farcas¹, Marcel Geertz¹, Petya Zhelyazkova¹, Klaudia Brix¹, Andrew Travers² & Georgi Muskhelishvili¹

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7.A conserved small RNA promotes silencing of the outer membrane protein YbfM

Anders Aamann Rasmussen,Jesper Johansen, Jesper S. Nielsen, Martin Overgaard, Birgitte Kallipolitis, Poul Valentin-Hansen

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8. Biotechnology sector in India: strengths, limitations, remedies and outlook

S Natesh, MK Bhan

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8. PGC-1-Related Coactivator Modulates Mitochondrial-Nuclear Crosstalk through Endogenous Nitric Oxide in a Cellular Model of Oncocytic Thyroid Tumours

Mahatsangy Raharijaona^1,2#, Soazig Le Pennec^3,4#, Julie Poirier^3,4, Delphine Mirebeau-Prunier^3,4,5, Clothilde Rouxel^3,4, Caroline Jacques^3,4, Jean-Fred Fontaine^3,4, Yves Malthiery^3,4,5, Rémi Houlgatte^1,2, Frédérique Savagner^1,3,4,5*

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9. LIMS IMPLEMENTATION IN A GENOTYPING STUDY

[PDF] from iupui.eduD Kennedy – 2009 – scholarworks.iupui.edu

… The LIMS application used was Biotracker TM (Ocimum Biosolutions), and its modular

design led users through each step … Informatics), Biotracker (Ocimum Biosolutions

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10. Interstrain genomic comparison reveals a crucial role for IS elements in the evolution of Lactobacillus helveticus.
P Kaleta, J O’Callaghan, GF Fitzgerald… – Applied and …, 2009 – Am Soc Microbiol
… 147 148 Array design. cDNA microarrays were obtained from the Ocimum Biosolutions Ltd. 149 …
prepared by mixing 40 µl of purified labelled DNA with 10 µl of salmon sperm DNA 193 (1 µg/
µl) and 120 µl of salt-based hybridization buffer (Ocimum Biosolutions Ltd.)

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11. Parkinson’s disease-associated parkin colocalizes with Alzheimer’s disease and multiple sclerosis brain lesions
ME Witte, JGJM Bol, WH Gerritsen, P Valk… – Neurobiology of …, 2009 – Elsevier
… All oligonucleotides were synthesized by Ocimum Biosolutions (Ocimum Biosolutions, IJsselstein,
the Netherlands). Statistical analysis was performed using one-way ANOVA followed by Students’
t-test (analyzed by GraphPad Prism, version 4.03)

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Articles in 2008

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1. Novel markers of inflammation identified in tumor necrosis factor receptor–associated periodic syndrome (TRAPS) by transcriptomic analysis of effects of TRAPS-associated tumor necrosis factor receptor type I mutations in an endothelial cell line

Susana L. Rebelo, Mohammad R. Amel-Kashipaz, Paul M. Radford, Susan E. Bainbridge, Roel Fiets, Johnny Fang, Elizabeth M. McDermott, Richard J. Powell, Ian Todd, Patrick J. Tighe

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2. ROLE OF SPECIFIC SIGNALLING MOLECULES DURING PROLIFERATION OF CD4+ T CELLS IN RESPONSE TO DIFFERENT STIMULI

D .Sharma ,S.K.Sandur,R.Checker,R.Raghuand K.B.Sainis RadiationBiology & Health Sciences Division and S. Khanam Tata Institute of Fundamental Research , Mumbai

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3. Three Consecutive Arginines Are Important for the Mycobacterial Peptide Deformylase Enzyme Activity

Rahul Saxena ¹, Pavitra Kanudia, Manish Datt, Haider Hussain Dar, ubramanian Karthikeyan, Balvinder Singh and             Pradip K. Chakraborti ²

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4.Differential Gene Expression in Danio rerio during Optic Nerve Regeneration

Katherine E. Saul

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5. Serial changes in expression of functionally clustered genes in progression of liver fibrosis in hepatitis C patients

Yoshiyuki Takahara, Mitsuo Takahashi, Qing-Wei Zhang, Hirotaka Wagatsuma, Maiko Mori, Akihiro Tamori, Susumu Shiomi, and Shuhei Nishiguchi

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6.  Hypoxia selects for androgen independent LNCaP cells with a more malignant geno- and phenotype

Karl T. Butterworth¹, Helen O. McCarthy¹, Andrea Devlin², Louise Ming², Tracy Robson¹, Stephanie R. McKeown²,

Jenny Worthington^2,*,†

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6.Perceiving molecular evolution processes in Escherichia coli by comprehensive metabolite and gene expression profiling

Chandran Vijayendran^1,2*, Aiko Barsch³, Karl Friehs², Karsten Niehaus³, Anke Becker³ and Erwin Flaschel²

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7. Nonvirally Modified Autologous Primary Hepatocytes Correct Diabetes and Prevent Target Organ Injury in a Large Preclinical Model

Nelson K. F. Chen¹, Jen San Wong^1,2, Irene H. C. Kee³, Siang Hui Lai⁴, Choon Hua Thng⁵, Wai Har Ng¹, Robert T. H. Ng³, Soo Yong Tan⁶, Shu Yen Lee⁷, Mark E. H. Tan¹, Jaichandran Sivalingam¹, Pierce K. H. Chow^2,3*, Oi Lian Kon^1*

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8. Nonvirally Modified Autologous Primary Hepatocytes Correct Diabetes and Prevent Target Organ Injury in a Large Preclinical Model

Nelson K. F. Chen¹, Jen San Wong^1,2, Irene H. C. Kee³, Siang Hui Lai⁴, Choon Hua Thng⁵, Wai Har Ng¹, Robert T. H. Ng³, Soo Yong Tan⁶, Shu Yen Lee⁷, Mark E. H. Tan¹, Jaichandran Sivalingam¹, Pierce K. H. Chow^2,3*, Oi Lian Kon^1*

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9. A two-genome microarray for the rice pathogens Xanthomonas oryzae pv. oryzae and X. oryzae pv. oryzicola and its use in the discovery of a difference in their regulation of hrp genes

Young-Su Seo^1* , Malinee Sriariyanun^1*, Li Wang^2,6, Janice Pfeiff³, Jirapa Phetsom¹, Ye Lin⁴, Ki-Hong Jung¹, Hui Hsien Chou^4,5, Adam Bogdanove² and Pamela Ronald¹

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10. Key Role of Mfd in the Development of Fluoroquinolone Resistance in Campylobacter jejuni

Jing Han, Orhan Sahin, Yi-Wen Barton, Qijing Zhang^*

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11. METHOD AND SYSTEM FOR PREPARING A MICROARRAY FOR A DISEASE ASSOCIATION GENE TRANSCRIPT TEST

Sproles, Dean Iverson (Seattle, WA, US)

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12. Key Role of Mfd in the Development of Fluoroquinolone Resistance in Campylobacter jejuni

Han, Jing ; Sahin, Orhan ; Barton, Yi-Wen ; Zhang, Qijing ^*

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13. Effect of RNA quality on transcript intensity levels in microarray analysis of human post-mortem brain tissues

Tatiana Popova, Detlev Mennerich, Andreas Weith and Karsten Quast

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14. Altered development of the brain after focal herpesvirus infection of the central nervous system

Thad Koontz ¹, Marina Bralic ⁴, Jelena Tomac ⁴, Ester Pernjak-Pugel ⁴ , Glen Bantug ³, Stipan Jonjic ⁴, and William J. Britt ^1,2,3

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Articles in 2007

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1. What Drives New Ventures to Internationalize from Emerging to Developed Economies?

Jonathan D. Partridge ‡ , Guido Sanguinetti § , David P. Dibden ‡ ,Ruth E. Roberts ‡ ,Robert K. Poole ‡ and Jeffrey              Green ‡ 1

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2.  Optimal encoding rules for synthetic genes: the need for a community effort

Gang Wu¹, Laura Dress²&Stephen J Freeland³

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3. Modulation of Host Gene Expression by the K15 Protein of Kaposi’s Sarcoma-Associated Herpesvirus

Melanie M. Brinkmann,¹, Marcel Pietrek,¹ Oliver Dittrich-Breiholz,² Michael Kracht,² and Thomas F. Schulz^1*

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4. A Comparative Analysis of Perturbations Caused by a Gene Knock-out, a Dominant Negative Allele, and a Set of Peptide Aptamers

Nadia Abed^‡§, Marc Bickle^¶, Bernard Mari^‖, Matthieu Schapira^¶, Raquel Sanjuan-España^‡, Karine Robbe Sermesant^‖, Olivier Moncorgé^¶, Sandrine Mouradian-Garcia^‡, Pascal Barbry^‖, Brian B. Rudkin^‡, Marie-Odile Fauvarque^**, Isabelle Michaud-Soret^§‡‡ and Pierre Colas^‡¶§§

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5. Polymorphism and regulation of the spxB (pyruvate oxidase) virulence factor gene by a CBS-HotDog domain protein (SpxR) in serotype 2 Streptococcus pneumoniae

Smirla Ramos-Montañez^1,†, Ho-Ching Tiffany Tsui^1,†, Kyle J. Wayne¹, Jordan L. Morris¹, Lindsey E. Peters¹, Faming Zhang², Krystyna M. Kazmierczak¹, Lok-To Sham¹, Malcolm E. Winkler^1,*

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Articles in 2006

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1. Escherichia coli Transcriptome Dynamics during the Transition from Anaerobic to Aerobic Conditions

Jonathan D. Partridge, Colin Scott, Yue Tang, Robert K. Poole and Jeffrey Green 1

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2. A sequence-oriented comparison of gene expression measurements across different hybridization-based technologies

Winston Patrick Kuo^1,2,3,18, Fang Liu^4,18, Jeff Trimarchi², Claudio Punzo², Michael Lombardi⁵, Jasjit Sarang⁵, Mark E Whipple⁶, Malini Maysuria⁷, Kyle Serikawa⁷, Sun Young Lee⁸, Donald McCrann⁹, Jason Kang¹⁰, Jeffrey R Shearstone11, Jocelyn Burke^2,12, Daniel J Park^2,12, Xiaowei Wang^1,12, Trent L Rector², Paola Ricciardi-Castagnoli¹³, Steven Perrin11, Sangdun Choi¹⁴, Roger Bumgarner⁷, Ju Han Kim¹⁵, Glenn F Short, III^2,12, Mason W Freeman^2,12, Brian Seed^2,12, Roderick Jensen⁵, George M Church², Eivind Hovig⁴, Connie L Cepko², Peter Park¹⁶, Lucila Ohno-Machado³ & Tor-Kristian Jenssen¹⁷

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3. Mammalian cell survival and processing in supercritical CO2

Patrick J. Ginty ^*,†, Daniel Howard ^*, Felicity R. A. J. Rose ^*, Martin J. Whitaker ^{* , †} , John J. A. Barry ^{* , †}, Patrick Tighe ^‡, Stacey R. Mutch^‡, Gulay Serhatkulu ^† , Richard O. C. Oreffo ^§, Steven M. Howdle ^†,¶,and Kevin M. Shakesheff^{*, ¶}

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Articles in 2005

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1. The stability of the Arabidopsis transcriptome in transgenic plants expressing the marker genes nptII and uidASouad El Ouakfaoui, Brian Miki

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Articles in 2004

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1. Asia Pacific Biotech News (APBN) – Global Development

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2. “Harnessing genomics to improve health in India” – an executive course to support genomics policy

Tara Acharya¹, Nandini K Kumar²,Vasantha Muthuswamy²,Abdallah S Daar1 and Peter A Singer¹

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Articles in 2002

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1. Asia Pacific Biotech News (APBN) – Industry Watch

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2.Asia Pacific Biotech News (APBN) – Company New

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3. Errors and Their Relevance in Microarray Data Analysis

D.Raje, V. Krishnan, S. Bundela and M.S. Rekha Rao

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4. Data Integration and Analysis: P.falciparum Microarray Data as a Case Study

Rekha Rao,Ashwin Sivakumar,Govind Rao

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Doctoral Dissertations

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Mechanisms of Antimicrobial Peptide Resistancein Campylobacter-
Ky Van HoangThe University of Tennessee

I found one of the doctoral dissertation papers online that uses a lot of our chips, buffers etc.